miRBase entry: nbr-mir-30d

Stem-loop nbr-mir-30d


Accession
MI0034370
Description
Neolamprologus brichardi nbr-mir-30d precursor miRNA


Sequence

UGUAAACAUCCUACACUCAGCUguuauugauugccacagaggcugagaggagguuguuuacuug
.(((((((.(((...(((((((.....((.....))....)))))))...))).)))))))...

Structure
--U       U   ACA       guuau  a 
   GUAAACA CCU   CUCAGCU     ug u
   ||||||| |||   |||||||     || u
   cauuugu gga   gagucgg     ac g
guu       u   gga       -agac  c 


Annotation confidence Not enough data
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Genome context
JH422309.1: 4877834-4877897 [+]

Database links

Mature nbr-miR-30d

Accession MIMAT0042527
Description Neolamprologus brichardi nbr-miR-30d mature miRNA
Sequence 1 - UGUAAACAUCCUACACUCAGCU - 22
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 25186727
    The genomic substrate for adaptive radiation in African cichlid fish
    "Brawand D, Wagner CE, Li YI, Malinsky M, Keller I, Fan S, Simakov O, Ng AY, Lim ZW, Bezault E, Turner-Maier J, Johnson J, Alcazar R, Noh HJ, Russell P, Aken B, Alfoldi J, Amemiya C, Azzouzi N, Baroiller JF, Barloy-Hubler F, Berlin A, Bloomquist R, Carleto"
    "Nature (2014) 513:375-381