miRBase entry: nbr-mir-460

Stem-loop nbr-mir-460


Accession
MI0034388
Description
Neolamprologus brichardi nbr-mir-460 precursor miRNA


Sequence

ccugcauuguacacacugugcguauaaaugucauaagCACAGCGCAUACAAUGUGGAUG
.((((((((((..(.((((((.(((.......))).)))))).)..))))))))))...

Structure
--c          ca a      g   aa 
   cugcauugua  c cugugc uau  a
   ||||||||||  | |||||| |||  u
   GGUGUAACAU  G GACACg aua  g
GUA          AC C      a   cu 


Annotation confidence Not enough data
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Genome context
JH422296.1: 50007-50065 [-]

Database links

Mature nbr-miR-460

Accession MIMAT0042541
Description Neolamprologus brichardi nbr-miR-460 mature miRNA
Sequence 38 - CACAGCGCAUACAAUGUGGAUG - 59
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 25186727
    The genomic substrate for adaptive radiation in African cichlid fish
    "Brawand D, Wagner CE, Li YI, Malinsky M, Keller I, Fan S, Simakov O, Ng AY, Lim ZW, Bezault E, Turner-Maier J, Johnson J, Alcazar R, Noh HJ, Russell P, Aken B, Alfoldi J, Amemiya C, Azzouzi N, Baroiller JF, Barloy-Hubler F, Berlin A, Bloomquist R, Carleto"
    "Nature (2014) 513:375-381