miRBase entry: nbr-mir-132a

Stem-loop nbr-mir-132a

Accession

MI0034396

Description

Neolamprologus brichardi nbr-mir-132a precursor miRNA

Sequence

accguggcauuagauuguuacuguaguaacagcaccaguggUAACAGUCUACAGCCAUGGUC
((((((((..((((((((((((((.((....))))....))))))))))))..)))))))).

Structure

-        au            ----  a  a 
 accguggc  uagauuguuacu    gu gu a
 ||||||||  ||||||||||||    || ||  
 UGGUACCG  AUCUGACAAUgg    ca cg c
C        AC            ugac  -  a

Annotation confidence Not enough data

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Genome context

JH422353.1: 1336706-1336767 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from nbr-mir-132a

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature nbr-miR-132a

Accession	MIMAT0042545
Description	Neolamprologus brichardi nbr-miR-132a mature miRNA
Sequence	42 - UAACAGUCUACAGCCAUGGUC - 62
Evidence	experimental Illumina [1]

References

PubMed ID: 25186727
The genomic substrate for adaptive radiation in African cichlid fish
"Brawand D, Wagner CE, Li YI, Malinsky M, Keller I, Fan S, Simakov O, Ng AY, Lim ZW, Bezault E, Turner-Maier J, Johnson J, Alcazar R, Noh HJ, Russell P, Aken B, Alfoldi J, Amemiya C, Azzouzi N, Baroiller JF, Barloy-Hubler F, Berlin A, Bloomquist R, Carleto"
"Nature (2014) 513:375-381