miRBase entry: nbr-mir-129-4

Stem-loop nbr-mir-129-4


Accession
MI0034402
Description
Neolamprologus brichardi nbr-mir-129-4 precursor miRNA


Sequence

CUUUUUGCGGUCUGGGCUUGCuguuccuaaggcaguagccaggaagcccuuaccccaaaaaguau
(((((((.(((..((((((.(((...(((......))).))).))))))..))).)))))))...

Structure
---       C   CU      G   uuc   ag 
   CUUUUUG GGU  GGGCUU Cug   cua  g
   ||||||| |||  |||||| |||   |||   
   gaaaaac cca  cccgaa gac   gau  c
uau       c   uu      g   --c   ga 


Annotation confidence Not enough data
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Genome context
JH422274.1: 9408306-9408370 [+]

Database links

Mature nbr-miR-129

Accession MIMAT0042546
Description Neolamprologus brichardi nbr-miR-129 mature miRNA
Sequence 1 - CUUUUUGCGGUCUGGGCUUGC - 21
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 25186727
    The genomic substrate for adaptive radiation in African cichlid fish
    "Brawand D, Wagner CE, Li YI, Malinsky M, Keller I, Fan S, Simakov O, Ng AY, Lim ZW, Bezault E, Turner-Maier J, Johnson J, Alcazar R, Noh HJ, Russell P, Aken B, Alfoldi J, Amemiya C, Azzouzi N, Baroiller JF, Barloy-Hubler F, Berlin A, Bloomquist R, Carleto"
    "Nature (2014) 513:375-381