miRBase entry: nbr-mir-24a-2

Stem-loop nbr-mir-24a-2

Accession

MI0034416

Description

Neolamprologus brichardi nbr-mir-24a-2 precursor miRNA

Sequence

ugccugcugugcugauaaucagugugugacgucggcUGGCUCAGUUCAGCAGGAACAG
..(((((((.(((((...(((((...........))))).))))).))))))).....

Structure

---ug       u     uaa     gugu 
     ccugcug gcuga   ucagu    g
     ||||||| |||||   |||||    a
     GGACGAC UGACU   GGUcg    c
GACAA       U     --C     gcug

Annotation confidence Not enough data

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Genome context

JH422293.1: 5860269-5860326 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from nbr-mir-24a-2

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature nbr-miR-24a

Accession	MIMAT0042559
Description	Neolamprologus brichardi nbr-miR-24a mature miRNA
Sequence	37 - UGGCUCAGUUCAGCAGGAACAG - 58
Evidence	experimental Illumina [1]

References

PubMed ID: 25186727
The genomic substrate for adaptive radiation in African cichlid fish
"Brawand D, Wagner CE, Li YI, Malinsky M, Keller I, Fan S, Simakov O, Ng AY, Lim ZW, Bezault E, Turner-Maier J, Johnson J, Alcazar R, Noh HJ, Russell P, Aken B, Alfoldi J, Amemiya C, Azzouzi N, Baroiller JF, Barloy-Hubler F, Berlin A, Bloomquist R, Carleto"
"Nature (2014) 513:375-381