miRBase entry: nbr-mir-365

Stem-loop nbr-mir-365

Accession

MI0034426

Description

Neolamprologus brichardi nbr-mir-365 precursor miRNA

Sequence

agggacuuuuaggggcagcuguguuuuauuaacccagucaUAAUGCCCCUAAAAAUCCUUAU
(((((.(((((((((((((((.(((.....))).)))).....))))))))))).)))))..

Structure

--     c           -----    u   u 
  aggga uuuuaggggca     gcug guu u
  ||||| |||||||||||     |||| ||| a
  UUCCU AAAAUCCCCGU     ugac caa u
UA     A           AAUac    c   u

Annotation confidence Not enough data

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Genome context

JH422284.1: 8294389-8294450 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from nbr-mir-365

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature nbr-miR-365

Accession	MIMAT0042568
Description	Neolamprologus brichardi nbr-miR-365 mature miRNA
Sequence	41 - UAAUGCCCCUAAAAAUCCUUAU - 62
Evidence	experimental Illumina [1]

References

PubMed ID: 25186727
The genomic substrate for adaptive radiation in African cichlid fish
"Brawand D, Wagner CE, Li YI, Malinsky M, Keller I, Fan S, Simakov O, Ng AY, Lim ZW, Bezault E, Turner-Maier J, Johnson J, Alcazar R, Noh HJ, Russell P, Aken B, Alfoldi J, Amemiya C, Azzouzi N, Baroiller JF, Barloy-Hubler F, Berlin A, Bloomquist R, Carleto"
"Nature (2014) 513:375-381