miRBase entry: nbr-mir-218a-1

Stem-loop nbr-mir-218a-1


Accession
MI0034435
Description
Neolamprologus brichardi nbr-mir-218a-1 precursor miRNA


Sequence

UUGUGCUUGAUCUAACCAUGUGgcugccagguuccuaucguggaacaugguucuuucaagcaccaug
..((((((((...((((((((..((((..(((....))))))).))))))))...))))))))....

Structure
--UU        UCU        Gg    ca   u 
    GUGCUUGA   AACCAUGU  cugc  ggu c
    ||||||||   ||||||||  ||||  |||  
    cacgaacu   uugguaca  ggug  cua c
guac        uuc        -a    --   u 


Annotation confidence Not enough data
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Genome context
JH422284.1: 4949351-4949417 [+]

Database links

Mature nbr-miR-218a

Accession MIMAT0042575
Description Neolamprologus brichardi nbr-miR-218a mature miRNA
Sequence 1 - UUGUGCUUGAUCUAACCAUGUG - 22
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 25186727
    The genomic substrate for adaptive radiation in African cichlid fish
    "Brawand D, Wagner CE, Li YI, Malinsky M, Keller I, Fan S, Simakov O, Ng AY, Lim ZW, Bezault E, Turner-Maier J, Johnson J, Alcazar R, Noh HJ, Russell P, Aken B, Alfoldi J, Amemiya C, Azzouzi N, Baroiller JF, Barloy-Hubler F, Berlin A, Bloomquist R, Carleto"
    "Nature (2014) 513:375-381