miRBase entry: nbr-mir-23a-3

Stem-loop nbr-mir-23a-3

Accession

MI0034441

Description

Neolamprologus brichardi nbr-mir-23a-3 precursor miRNA

Sequence

gggauuccuggcagagugauuugguugugauguaauguaaAUCACAUUGCCAGGGAUUUCCA
((((((((((((((.((((((((((((.....)))).)))))))).))))))))))))))..

Structure

--              a        -    u 
  gggauuccuggcag gugauuug guug g
  |||||||||||||| |||||||| |||| a
  CUUUAGGGACCGUU CACUAaau uaau u
AC              A        g    g

Annotation confidence Not enough data

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Genome context

JH422296.1: 729641-729702 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from nbr-mir-23a-3

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature nbr-miR-23a

Accession	MIMAT0042542
Description	Neolamprologus brichardi nbr-miR-23a mature miRNA
Sequence	41 - AUCACAUUGCCAGGGAUUUCCA - 62
Evidence	experimental Illumina [1]

References

PubMed ID: 25186727
The genomic substrate for adaptive radiation in African cichlid fish
"Brawand D, Wagner CE, Li YI, Malinsky M, Keller I, Fan S, Simakov O, Ng AY, Lim ZW, Bezault E, Turner-Maier J, Johnson J, Alcazar R, Noh HJ, Russell P, Aken B, Alfoldi J, Amemiya C, Azzouzi N, Baroiller JF, Barloy-Hubler F, Berlin A, Bloomquist R, Carleto"
"Nature (2014) 513:375-381