miRBase entry: nbr-mir-27e-2

Stem-loop nbr-mir-27e-2


Accession
MI0034458
Description
Neolamprologus brichardi nbr-mir-27e-2 precursor miRNA


Sequence

agaacuuagcucauuagugagcauuacacaaaaaaggaaauugUUCACAGUGGCUAAGUUCAGU
.(((((((((.((((.(((((((.....(......).....))))))))))))))))))))...

Structure
--a         u    a       uuaca aa 
   gaacuuagc cauu gugagca     c  a
   ||||||||| |||| |||||||     |   
   CUUGAAUCG GUGA CACUUgu     g  a
UGA         -    -       uaaag aa 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
JH422296.1: 2855270-2855333 [-]

Database links

Mature nbr-miR-27e

Accession MIMAT0042540
Description Neolamprologus brichardi nbr-miR-27e mature miRNA
Sequence 44 - UUCACAGUGGCUAAGUUCAGU - 64
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 25186727
    The genomic substrate for adaptive radiation in African cichlid fish
    "Brawand D, Wagner CE, Li YI, Malinsky M, Keller I, Fan S, Simakov O, Ng AY, Lim ZW, Bezault E, Turner-Maier J, Johnson J, Alcazar R, Noh HJ, Russell P, Aken B, Alfoldi J, Amemiya C, Azzouzi N, Baroiller JF, Barloy-Hubler F, Berlin A, Bloomquist R, Carleto"
    "Nature (2014) 513:375-381