miRBase entry: nbr-let-7b-2

Stem-loop nbr-let-7b-2

Accession

MI0034460

Description

Neolamprologus brichardi nbr-let-7b-2 precursor miRNA

Sequence

uuauccagccuguagggccuuuacugauguucguacggggUGAGGUAGUAGGUUGUGUGGUU
((((.(((((((....(((((.(((..(((....))).))))))))..))))))).))))..

Structure

--    c       uagg     u   ga   u 
  uuau cagccug    gccuu acu  ugu c
  |||| |||||||    ||||| |||  |||  
  GGUG GUUGGAU    UGGAG Ugg  gca g
UU    U       --GA     -   -g   u

Annotation confidence Not enough data

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Genome context

JH422276.1: 12828393-12828454 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from nbr-let-7b-2

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature nbr-let-7b

Accession	MIMAT0042564
Description	Neolamprologus brichardi nbr-let-7b mature miRNA
Sequence	41 - UGAGGUAGUAGGUUGUGUGGUU - 62
Evidence	experimental Illumina [1]

References

PubMed ID: 25186727
The genomic substrate for adaptive radiation in African cichlid fish
"Brawand D, Wagner CE, Li YI, Malinsky M, Keller I, Fan S, Simakov O, Ng AY, Lim ZW, Bezault E, Turner-Maier J, Johnson J, Alcazar R, Noh HJ, Russell P, Aken B, Alfoldi J, Amemiya C, Azzouzi N, Baroiller JF, Barloy-Hubler F, Berlin A, Bloomquist R, Carleto"
"Nature (2014) 513:375-381