miRBase entry: nbr-mir-132b

Stem-loop nbr-mir-132b


Accession
MI0034467
Description
Neolamprologus brichardi nbr-mir-132b precursor miRNA


Sequence

ACCGUGGCUUUAGAUUGUUACUcuagcaacagcaccaugguaacagucuacagccaugguc
(((((((((.((((((((((((...((....)).....)))))))))))).))))))))).

Structure
-         U            --cua  a 
 ACCGUGGCU UAGAUUGUUACU     gc a
 ||||||||| ||||||||||||     ||  
 ugguaccga aucugacaaugg     cg c
c         c            uacca  a 


Annotation confidence Not enough data
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Genome context
JH422512.1: 165486-165546 [+]
Clustered miRNAs
1 other miRNA is < 10 kb from nbr-mir-132b
Name Accession Chromosome Start End Strand Confidence




Database links

Mature nbr-miR-132b

Accession MIMAT0042588
Description Neolamprologus brichardi nbr-miR-132b mature miRNA
Sequence 1 - ACCGUGGCUUUAGAUUGUUACU - 22
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 25186727
    The genomic substrate for adaptive radiation in African cichlid fish
    "Brawand D, Wagner CE, Li YI, Malinsky M, Keller I, Fan S, Simakov O, Ng AY, Lim ZW, Bezault E, Turner-Maier J, Johnson J, Alcazar R, Noh HJ, Russell P, Aken B, Alfoldi J, Amemiya C, Azzouzi N, Baroiller JF, Barloy-Hubler F, Berlin A, Bloomquist R, Carleto"
    "Nature (2014) 513:375-381