miRBase entry: nbr-mir-196b

Stem-loop nbr-mir-196b


Accession
MI0034471
Description
Neolamprologus brichardi nbr-mir-196b precursor miRNA


Sequence

UAGGUAGUCUCAUGUUGUUGGGCuauauuauuucucccacaacacaaaacugccuuga
.(((((((....((((((.(((.............)))))))))....)))))))...

Structure
--U       CUCA      U   Cuaua 
   AGGUAGU    UGUUGU GGG     u
   |||||||    |||||| |||     u
   uccguca    acaaca ccc     a
agu       aaac      -   ucuuu 


Annotation confidence Not enough data
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Genome context
JH422352.1: 1725907-1725964 [-]

Database links

Mature nbr-miR-196b

Accession MIMAT0042592
Description Neolamprologus brichardi nbr-miR-196b mature miRNA
Sequence 1 - UAGGUAGUCUCAUGUUGUUGGGC - 23
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 25186727
    The genomic substrate for adaptive radiation in African cichlid fish
    "Brawand D, Wagner CE, Li YI, Malinsky M, Keller I, Fan S, Simakov O, Ng AY, Lim ZW, Bezault E, Turner-Maier J, Johnson J, Alcazar R, Noh HJ, Russell P, Aken B, Alfoldi J, Amemiya C, Azzouzi N, Baroiller JF, Barloy-Hubler F, Berlin A, Bloomquist R, Carleto"
    "Nature (2014) 513:375-381