miRBase entry: nbr-mir-24b

Stem-loop nbr-mir-24b

Accession

MI0034472

Description

Neolamprologus brichardi nbr-mir-24b precursor miRNA

Sequence

UGCCUACUGAACUGGUAUCAGUguuacaccugaaaacuggcucaguucagcaggaacag
..(((.(((((((((..(((((.............))))).))))))))).))).....

Structure

---UG   A         UA     guuac 
     CCU CUGAACUGG  UCAGU     a
     ||| |||||||||  |||||     c
     gga gacuugacu  gguca     c
gacaa   c         -c     aaagu

Annotation confidence Not enough data

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Genome context

JH422373.1: 1151941-1151999 [+]

Clustered miRNAs

2 other miRNAs are < 10 kb from nbr-mir-24b

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature nbr-miR-24b

Accession	MIMAT0042593
Description	Neolamprologus brichardi nbr-miR-24b mature miRNA
Sequence	1 - UGCCUACUGAACUGGUAUCAGU - 22
Evidence	experimental Illumina [1]

References

PubMed ID: 25186727
The genomic substrate for adaptive radiation in African cichlid fish
"Brawand D, Wagner CE, Li YI, Malinsky M, Keller I, Fan S, Simakov O, Ng AY, Lim ZW, Bezault E, Turner-Maier J, Johnson J, Alcazar R, Noh HJ, Russell P, Aken B, Alfoldi J, Amemiya C, Azzouzi N, Baroiller JF, Barloy-Hubler F, Berlin A, Bloomquist R, Carleto"
"Nature (2014) 513:375-381