miRBase entry: nbr-mir-31

Stem-loop nbr-mir-31


Accession
MI0034485
Description
Neolamprologus brichardi nbr-mir-31 precursor miRNA


Sequence

AGGCAAGAUGUUGGCAUAGCUGuugaguuaaaaacccugcuaugccgacaaauugccauc
.(((((..((((((((((((.(((........)))...))))))))))))..)))))...

Structure
--A     GA            --U   gag 
   GGCAA  UGUUGGCAUAGC   Guu   u
   |||||  ||||||||||||   |||    
   ccguu  acagccguaucg   caa   u
cua     aa            ucc   aaa 


Annotation confidence Not enough data
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Genome context
JH422364.1: 2327009-2327068 [+]

Database links

Mature nbr-miR-31

Accession MIMAT0042604
Description Neolamprologus brichardi nbr-miR-31 mature miRNA
Sequence 1 - AGGCAAGAUGUUGGCAUAGCUG - 22
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 25186727
    The genomic substrate for adaptive radiation in African cichlid fish
    "Brawand D, Wagner CE, Li YI, Malinsky M, Keller I, Fan S, Simakov O, Ng AY, Lim ZW, Bezault E, Turner-Maier J, Johnson J, Alcazar R, Noh HJ, Russell P, Aken B, Alfoldi J, Amemiya C, Azzouzi N, Baroiller JF, Barloy-Hubler F, Berlin A, Bloomquist R, Carleto"
    "Nature (2014) 513:375-381