miRBase entry: nbr-mir-728

Stem-loop nbr-mir-728

Accession

MI0034493

Description

Neolamprologus brichardi nbr-mir-728 precursor miRNA

Sequence

aaauguaguagacuauaaguauacaugaaacucagaaaguAUACUAAGUAUACUACGUUUAC
((((((((((.(((...(((((((..............))))))).))).))))))))))..

Structure

--          g   aua       augaaa 
  aaauguagua acu   aguauac      c
  |||||||||| |||   |||||||       
  UUUGCAUCAU UGA   UCAUAug      u
CA          A   --A       aaagac

Annotation confidence Not enough data

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Genome context

JH422283.1: 10367698-10367759 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from nbr-mir-728

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature nbr-miR-728

Accession	MIMAT0042614
Description	Neolamprologus brichardi nbr-miR-728 mature miRNA
Sequence	41 - AUACUAAGUAUACUACGUUUAC - 62
Evidence	experimental Illumina [1]

References

PubMed ID: 25186727
The genomic substrate for adaptive radiation in African cichlid fish
"Brawand D, Wagner CE, Li YI, Malinsky M, Keller I, Fan S, Simakov O, Ng AY, Lim ZW, Bezault E, Turner-Maier J, Johnson J, Alcazar R, Noh HJ, Russell P, Aken B, Alfoldi J, Amemiya C, Azzouzi N, Baroiller JF, Barloy-Hubler F, Berlin A, Bloomquist R, Carleto"
"Nature (2014) 513:375-381