miRBase entry: nbr-mir-457

Stem-loop nbr-mir-457

Accession

MI0034495

Description

Neolamprologus brichardi nbr-mir-457 precursor miRNA

Sequence

UAGCAGCACAUCAUUACUGGUAuuuuucacugcauuaccaguauguuaugugcugcuucu
.((((((((((...((((((((.............))))))))....))))))))))...

Structure

--U          -CAU        uuuuu 
   AGCAGCACAU    UACUGGUA     c
   ||||||||||    ||||||||     a
   ucgucgugua    augaccau     c
ucu          uugu        uacgu

Annotation confidence Not enough data

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Genome context

JH422539.1: 154672-154731 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from nbr-mir-457

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature nbr-miR-457

Accession	MIMAT0042616
Description	Neolamprologus brichardi nbr-miR-457 mature miRNA
Sequence	1 - UAGCAGCACAUCAUUACUGGUA - 22
Evidence	experimental Illumina [1]

References

PubMed ID: 25186727
The genomic substrate for adaptive radiation in African cichlid fish
"Brawand D, Wagner CE, Li YI, Malinsky M, Keller I, Fan S, Simakov O, Ng AY, Lim ZW, Bezault E, Turner-Maier J, Johnson J, Alcazar R, Noh HJ, Russell P, Aken B, Alfoldi J, Amemiya C, Azzouzi N, Baroiller JF, Barloy-Hubler F, Berlin A, Bloomquist R, Carleto"
"Nature (2014) 513:375-381