miRBase entry: nbr-mir-2187b

Stem-loop nbr-mir-2187b


Accession
MI0034497
Description
Neolamprologus brichardi nbr-mir-2187b precursor miRNA


Sequence

UUUAAUUAGUACAGCCUGUAUUaguaaugucaucuauucuuuacaggcuaugcuaaucuaugc
....(((((((.((((((((..((.((((.....)))))).)))))))).)))))))......

Structure
--UUUA       C        UU  u    u 
      AUUAGUA AGCCUGUA  ag aaug c
      ||||||| ||||||||  || |||| a
      uaaucgu ucggacau  uc uuau u
cguauc       a        -u  -    c 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
JH422354.1: 1784031-1784093 [+]

Database links

Mature nbr-miR-2187b

Accession MIMAT0042618
Description Neolamprologus brichardi nbr-miR-2187b mature miRNA
Sequence 1 - UUUAAUUAGUACAGCCUGUAUU - 22
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 25186727
    The genomic substrate for adaptive radiation in African cichlid fish
    "Brawand D, Wagner CE, Li YI, Malinsky M, Keller I, Fan S, Simakov O, Ng AY, Lim ZW, Bezault E, Turner-Maier J, Johnson J, Alcazar R, Noh HJ, Russell P, Aken B, Alfoldi J, Amemiya C, Azzouzi N, Baroiller JF, Barloy-Hubler F, Berlin A, Bloomquist R, Carleto"
    "Nature (2014) 513:375-381