miRBase entry: nbr-mir-219a

Stem-loop nbr-mir-219a


Accession
MI0034500
Description
Neolamprologus brichardi nbr-mir-219a precursor miRNA


Sequence

ugauuguccaaacgcaauucuugugaaauuucaaauccaacccgAGAAUUGUGCCUGGACAUCUGU
.(((.(((((..((((((((((((((....))).........)))))))))))..))))))))...

Structure
--u   u     aa           ---------   a 
   gau gucca  cgcaauucuug         uga a
   ||| |||||  |||||||||||         |||  
   CUA CAGGU  GUGUUAAGAgc         acu u
UGU   -     CC           ccaaccuaa   u 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
JH422325.1: 1104741-1104806 [+]

Database links

Mature nbr-miR-219a

Accession MIMAT0042621
Description Neolamprologus brichardi nbr-miR-219a mature miRNA
Sequence 45 - AGAAUUGUGCCUGGACAUCUGU - 66
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 25186727
    The genomic substrate for adaptive radiation in African cichlid fish
    "Brawand D, Wagner CE, Li YI, Malinsky M, Keller I, Fan S, Simakov O, Ng AY, Lim ZW, Bezault E, Turner-Maier J, Johnson J, Alcazar R, Noh HJ, Russell P, Aken B, Alfoldi J, Amemiya C, Azzouzi N, Baroiller JF, Barloy-Hubler F, Berlin A, Bloomquist R, Carleto"
    "Nature (2014) 513:375-381