miRBase entry: nbr-mir-33a

Stem-loop nbr-mir-33a


Accession
MI0034503
Description
Neolamprologus brichardi nbr-mir-33a precursor miRNA


Sequence

gugcauuguaguugcauugcaugauccugaagccgagugCAAUGUGUCUGCAGUGCAGUA
.((((((((((..(((((((((..((........)))))))))))..))))))))))...

Structure
--g          uu         ga  cug 
   ugcauuguag  gcauugcau  uc   a
   ||||||||||  |||||||||  ||    
   ACGUGACGUC  UGUAACgug  ag   a
AUG          UG         --  ccg 


Annotation confidence Not enough data
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Genome context
JH422327.1: 977468-977527 [-]

Database links

Mature nbr-miR-33a

Accession MIMAT0042625
Description Neolamprologus brichardi nbr-miR-33a mature miRNA
Sequence 40 - CAAUGUGUCUGCAGUGCAGUA - 60
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 25186727
    The genomic substrate for adaptive radiation in African cichlid fish
    "Brawand D, Wagner CE, Li YI, Malinsky M, Keller I, Fan S, Simakov O, Ng AY, Lim ZW, Bezault E, Turner-Maier J, Johnson J, Alcazar R, Noh HJ, Russell P, Aken B, Alfoldi J, Amemiya C, Azzouzi N, Baroiller JF, Barloy-Hubler F, Berlin A, Bloomquist R, Carleto"
    "Nature (2014) 513:375-381