Stem-loop nbr-mir-148

Accession

MI0034505

Description

Neolamprologus brichardi nbr-mir-148 precursor miRNA

Sequence

AAGUUCUGUGAUACACUUAGACUcuaacugcccgcagUCAGUGCAUUACAGAACUUUG
((((((((((((.((((..(((((.........).)))))))).))))))))))))..

Structure

--            A    UA    - uaa 
  AAGUUCUGUGAU CACU  GACU c   c
  |||||||||||| ||||  |||| |   u
  UUCAAGACAUUA GUGA  CUga g   g
GU            C    --    c ccc 

Annotation confidence Not enough data

Genome context

JH422286.1: 6922185-6922242 [-]

Mature nbr-miR-148-5p

• Accession: MIMAT0042627
• Description: Neolamprologus brichardi nbr-miR-148-5p mature miRNA
• Sequence: 1 - AAGUUCUGUGAUACACUUAGACU - 23
• Evidence: experimental ; Illumina [1]

Mature nbr-miR-148-3p

• Accession: MIMAT0042628
• Description: Neolamprologus brichardi nbr-miR-148-3p mature miRNA
• Sequence: 38 - UCAGUGCAUUACAGAACUUUG - 58
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25186727
   The genomic substrate for adaptive radiation in African cichlid fish
   "Brawand D, Wagner CE, Li YI, Malinsky M, Keller I, Fan S, Simakov O, Ng AY, Lim ZW, Bezault E, Turner-Maier J, Johnson J, Alcazar R, Noh HJ, Russell P, Aken B, Alfoldi J, Amemiya C, Azzouzi N, Baroiller JF, Barloy-Hubler F, Berlin A, Bloomquist R, Carleto"
   "Nature (2014) 513:375-381