miRBase entry: nbr-mir-8159

Stem-loop nbr-mir-8159


Accession
MI0034516
Description
Neolamprologus brichardi nbr-mir-8159 precursor miRNA


Sequence

UCAGUAACUGGAAUCUGUCCCUGCaugguaaaagugugcagggccuggcugguuacugcacc
.((((((((((.....(.(((((((((.......))))))))).)...))))))))))....

Structure
---U          AAUCU U         gu 
    CAGUAACUGG     G CCCUGCaug  a
    ||||||||||     | |||||||||  a
    gucauugguc     c gggacgugu  a
ccac          --ggu c         ga 


Annotation confidence Not enough data
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Genome context
JH422361.1: 1923162-1923223 [+]

Database links

Mature nbr-miR-8159

Accession MIMAT0042640
Description Neolamprologus brichardi nbr-miR-8159 mature miRNA
Sequence 1 - UCAGUAACUGGAAUCUGUCCCUGC - 24
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 25186727
    The genomic substrate for adaptive radiation in African cichlid fish
    "Brawand D, Wagner CE, Li YI, Malinsky M, Keller I, Fan S, Simakov O, Ng AY, Lim ZW, Bezault E, Turner-Maier J, Johnson J, Alcazar R, Noh HJ, Russell P, Aken B, Alfoldi J, Amemiya C, Azzouzi N, Baroiller JF, Barloy-Hubler F, Berlin A, Bloomquist R, Carleto"
    "Nature (2014) 513:375-381