miRBase entry: oni-mir-10a-2

Stem-loop oni-mir-10a-2


Accession
MI0034519
Description
Oreochromis niloticus oni-mir-10a-2 precursor miRNA

Literature search
2 open access papers mention oni-mir-10a-2
(15 sentences)

Sequence

UACCCUGUAGAACCGAAUUUGUgugaaguacaagcagucgcaaauacgucucuacaggaaua
...((((((((..((.(((((((....((....))...))))))).))..))))))))....

Structure
-UAC        AC  A       ugaa  a 
    CCUGUAGA  CG AUUUGUg    gu c
    ||||||||  || |||||||    ||  
    ggacaucu  gc uaaacgc    cg a
auaa        cu  a       -uga  a 


Annotation confidence Not enough data
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Genome context
CM001463.1: 24841715-24841776 [-]

Database links

Mature oni-miR-10a

Accession MIMAT0042642
Description Oreochromis niloticus oni-miR-10a mature miRNA
Sequence 1 - UACCCUGUAGAACCGAAUUUGU - 22
Evidence experimental
Illumina [1-2]

References

  1. PubMed ID: 25186727
    The genomic substrate for adaptive radiation in African cichlid fish
    "Brawand D, Wagner CE, Li YI, Malinsky M, Keller I, Fan S, Simakov O, Ng AY, Lim ZW, Bezault E, Turner-Maier J, Johnson J, Alcazar R, Noh HJ, Russell P, Aken B, Alfoldi J, Amemiya C, Azzouzi N, Baroiller JF, Barloy-Hubler F, Berlin A, Bloomquist R, Carleto"
    "Nature (2014) 513:375-381

  2. PubMed ID: 25199625
    Identification of male-specific amh duplication, sexually differentially expressed genes and microRNAs at early embryonic development of Nile tilapia (Oreochromis niloticus)
    Eshel O, Shirak A, Dor L, Band M, Zak T, Markovich-Gordon M, Chalifa-Caspi V, Feldmesser E, Weller JI, Seroussi E, Hulata G, Ron M
    BMC Genomics (2014) 15:774