miRBase entry: oni-mir-126

Stem-loop oni-mir-126


Accession
MI0034574
Description
Oreochromis niloticus oni-mir-126 precursor miRNA

Literature search
1 open access papers mention oni-mir-126
(1 sentences)

Sequence

CAUUAUUACUUUUGGUACGCGcuaugccacucucaacucguaccgugaguaauaaugca
(((((((((((.(((((((.(...............).))))))).)))))))))))..

Structure
--           U       C cuaugc 
  CAUUAUUACUU UGGUACG G      c
  ||||||||||| ||||||| |      a
  guaauaaugag gccaugc c      c
ac           u       u aacucu 


Annotation confidence Not enough data
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Genome context
CM001450.1: 13313416-13313474 [+]

Database links

Mature oni-miR-126

Accession MIMAT0042673
Description Oreochromis niloticus oni-miR-126 mature miRNA
Sequence 1 - CAUUAUUACUUUUGGUACGCG - 21
Evidence experimental
Illumina [1-2]

References

  1. PubMed ID: 25186727
    The genomic substrate for adaptive radiation in African cichlid fish
    "Brawand D, Wagner CE, Li YI, Malinsky M, Keller I, Fan S, Simakov O, Ng AY, Lim ZW, Bezault E, Turner-Maier J, Johnson J, Alcazar R, Noh HJ, Russell P, Aken B, Alfoldi J, Amemiya C, Azzouzi N, Baroiller JF, Barloy-Hubler F, Berlin A, Bloomquist R, Carleto"
    "Nature (2014) 513:375-381

  2. PubMed ID: 25199625
    Identification of male-specific amh duplication, sexually differentially expressed genes and microRNAs at early embryonic development of Nile tilapia (Oreochromis niloticus)
    Eshel O, Shirak A, Dor L, Band M, Zak T, Markovich-Gordon M, Chalifa-Caspi V, Feldmesser E, Weller JI, Seroussi E, Hulata G, Ron M
    BMC Genomics (2014) 15:774