miRBase entry: oni-mir-455-1

Stem-loop oni-mir-455-1


Accession
MI0034598
Description
Oreochromis niloticus oni-mir-455-1 precursor miRNA


Sequence

UAUGUGCCCUUGGACUACAUCGuggaagccagcaccaugcaguccaugggcauauacac
(((((((((.((((((.(((.(((........))).))).)))))).)))))))))...

Structure
---         U      A   C   gaa 
   UAUGUGCCC UGGACU CAU Gug   g
   ||||||||| |||||| ||| |||    
   auauacggg accuga gua cac   c
cac         u      c   c   gac 


Annotation confidence Not enough data
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Genome context
CM001450.1: 15293206-15293264 [-]

Database links

Mature oni-miR-455

Accession MIMAT0042689
Description Oreochromis niloticus oni-miR-455 mature miRNA
Sequence 1 - UAUGUGCCCUUGGACUACAUCG - 22
Evidence experimental
Illumina [1-2]

References

  1. PubMed ID: 25186727
    The genomic substrate for adaptive radiation in African cichlid fish
    "Brawand D, Wagner CE, Li YI, Malinsky M, Keller I, Fan S, Simakov O, Ng AY, Lim ZW, Bezault E, Turner-Maier J, Johnson J, Alcazar R, Noh HJ, Russell P, Aken B, Alfoldi J, Amemiya C, Azzouzi N, Baroiller JF, Barloy-Hubler F, Berlin A, Bloomquist R, Carleto"
    "Nature (2014) 513:375-381

  2. PubMed ID: 25199625
    Identification of male-specific amh duplication, sexually differentially expressed genes and microRNAs at early embryonic development of Nile tilapia (Oreochromis niloticus)
    Eshel O, Shirak A, Dor L, Band M, Zak T, Markovich-Gordon M, Chalifa-Caspi V, Feldmesser E, Weller JI, Seroussi E, Hulata G, Ron M
    BMC Genomics (2014) 15:774