miRBase entry: oni-mir-92b

Stem-loop oni-mir-92b


Accession
MI0034603
Description
Oreochromis niloticus oni-mir-92b precursor miRNA

Literature search
2 open access papers mention oni-mir-92b
(7 sentences)

Sequence

agguccgggauguggugcacuguuguaauaucuccccuccaaUAUUGCACUCGUCCCGGCCUCC
(((.((((((((.((((((.(((((..............))))).)))))))))))))))))..

Structure
--   u        u      c     uaauau 
  agg ccgggaug ggugca uguug      c
  ||| |||||||| |||||| |||||       
  UCC GGCCCUGC UCACGU AUaac      u
CC   -        -      U     cucccc 


Annotation confidence Not enough data
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Genome context
CM001454.1: 30204982-30205045 [-]

Database links

Mature oni-miR-92b

Accession MIMAT0042694
Description Oreochromis niloticus oni-miR-92b mature miRNA
Sequence 43 - UAUUGCACUCGUCCCGGCCUCC - 64
Evidence experimental
Illumina [1-2]

References

  1. PubMed ID: 25186727
    The genomic substrate for adaptive radiation in African cichlid fish
    "Brawand D, Wagner CE, Li YI, Malinsky M, Keller I, Fan S, Simakov O, Ng AY, Lim ZW, Bezault E, Turner-Maier J, Johnson J, Alcazar R, Noh HJ, Russell P, Aken B, Alfoldi J, Amemiya C, Azzouzi N, Baroiller JF, Barloy-Hubler F, Berlin A, Bloomquist R, Carleto"
    "Nature (2014) 513:375-381

  2. PubMed ID: 25199625
    Identification of male-specific amh duplication, sexually differentially expressed genes and microRNAs at early embryonic development of Nile tilapia (Oreochromis niloticus)
    Eshel O, Shirak A, Dor L, Band M, Zak T, Markovich-Gordon M, Chalifa-Caspi V, Feldmesser E, Weller JI, Seroussi E, Hulata G, Ron M
    BMC Genomics (2014) 15:774