miRBase entry: oni-mir-460

Stem-loop oni-mir-460


Accession
MI0034632
Description
Oreochromis niloticus oni-mir-460 precursor miRNA


Sequence

ccugcauuguacacacugugcguauaaaugucauaagCACAGCGCAUACAAUGUGGAUG
.((((((((((..(.((((((.(((.......))).)))))).)..))))))))))...

Structure
--c          ca a      g   aa 
   cugcauugua  c cugugc uau  a
   ||||||||||  | |||||| |||  u
   GGUGUAACAU  G GACACg aua  g
GUA          AC C      a   cu 


Annotation confidence Not enough data
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Genome context
CM001461.1: 14143293-14143351 [-]

Database links

Mature oni-miR-460

Accession MIMAT0042717
Description Oreochromis niloticus oni-miR-460 mature miRNA
Sequence 38 - CACAGCGCAUACAAUGUGGAUG - 59
Evidence experimental
Illumina [1-2]

References

  1. PubMed ID: 25186727
    The genomic substrate for adaptive radiation in African cichlid fish
    "Brawand D, Wagner CE, Li YI, Malinsky M, Keller I, Fan S, Simakov O, Ng AY, Lim ZW, Bezault E, Turner-Maier J, Johnson J, Alcazar R, Noh HJ, Russell P, Aken B, Alfoldi J, Amemiya C, Azzouzi N, Baroiller JF, Barloy-Hubler F, Berlin A, Bloomquist R, Carleto"
    "Nature (2014) 513:375-381

  2. PubMed ID: 25199625
    Identification of male-specific amh duplication, sexually differentially expressed genes and microRNAs at early embryonic development of Nile tilapia (Oreochromis niloticus)
    Eshel O, Shirak A, Dor L, Band M, Zak T, Markovich-Gordon M, Chalifa-Caspi V, Feldmesser E, Weller JI, Seroussi E, Hulata G, Ron M
    BMC Genomics (2014) 15:774