miRBase entry: oni-mir-101a

Stem-loop oni-mir-101a


Accession
MI0034635
Description
Oreochromis niloticus oni-mir-101a precursor miRNA

Literature search
1 open access papers mention oni-mir-101a
(1 sentences)

Sequence

ucaguuaucacagugcugaugcuguccccaucgaaggUACAGUACUGUGAUAACUGAAG
((((((((((((((((((.((((.((......)).))))))))))))))))))))))..

Structure
--                  a    g  cc 
  ucaguuaucacagugcug ugcu uc  c
  |||||||||||||||||| |||| ||   
  AGUCAAUAGUGUCAUGAC AUgg ag  a
GA                  -    a  cu 


Annotation confidence Not enough data
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Genome context
CM001460.1: 1057945-1058003 [+]

Database links

Mature oni-miR-101a

Accession MIMAT0042720
Description Oreochromis niloticus oni-miR-101a mature miRNA
Sequence 38 - UACAGUACUGUGAUAACUGAAG - 59
Evidence experimental
Illumina [1-2]

References

  1. PubMed ID: 25186727
    The genomic substrate for adaptive radiation in African cichlid fish
    "Brawand D, Wagner CE, Li YI, Malinsky M, Keller I, Fan S, Simakov O, Ng AY, Lim ZW, Bezault E, Turner-Maier J, Johnson J, Alcazar R, Noh HJ, Russell P, Aken B, Alfoldi J, Amemiya C, Azzouzi N, Baroiller JF, Barloy-Hubler F, Berlin A, Bloomquist R, Carleto"
    "Nature (2014) 513:375-381

  2. PubMed ID: 25199625
    Identification of male-specific amh duplication, sexually differentially expressed genes and microRNAs at early embryonic development of Nile tilapia (Oreochromis niloticus)
    Eshel O, Shirak A, Dor L, Band M, Zak T, Markovich-Gordon M, Chalifa-Caspi V, Feldmesser E, Weller JI, Seroussi E, Hulata G, Ron M
    BMC Genomics (2014) 15:774