miRBase entry: oni-mir-190a-2

Stem-loop oni-mir-190a-2


Accession
MI0034666
Description
Oreochromis niloticus oni-mir-190a-2 precursor miRNA


Sequence

UGAUAUGUUUGAUAUAUUAGGUUGuuauucaguccaacuauauaucaaacauauuccu
.((((((((((((((((..(((((..........)))))))))))))))))))))...

Structure
--U                UA     uuau 
   GAUAUGUUUGAUAUAU  GGUUG    u
   ||||||||||||||||  |||||     
   uuauacaaacuauaua  ucaac    c
ucc                --     cuga 


Annotation confidence Not enough data
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Genome context
CM001450.1: 39300674-39300731 [+]

Database links

Mature oni-miR-190a

Accession MIMAT0042741
Description Oreochromis niloticus oni-miR-190a mature miRNA
Sequence 1 - UGAUAUGUUUGAUAUAUUAGGUUG - 24
Evidence experimental
Illumina [1-2]

References

  1. PubMed ID: 25186727
    The genomic substrate for adaptive radiation in African cichlid fish
    "Brawand D, Wagner CE, Li YI, Malinsky M, Keller I, Fan S, Simakov O, Ng AY, Lim ZW, Bezault E, Turner-Maier J, Johnson J, Alcazar R, Noh HJ, Russell P, Aken B, Alfoldi J, Amemiya C, Azzouzi N, Baroiller JF, Barloy-Hubler F, Berlin A, Bloomquist R, Carleto"
    "Nature (2014) 513:375-381

  2. PubMed ID: 25199625
    Identification of male-specific amh duplication, sexually differentially expressed genes and microRNAs at early embryonic development of Nile tilapia (Oreochromis niloticus)
    Eshel O, Shirak A, Dor L, Band M, Zak T, Markovich-Gordon M, Chalifa-Caspi V, Feldmesser E, Weller JI, Seroussi E, Hulata G, Ron M
    BMC Genomics (2014) 15:774