miRBase entry: oni-mir-219b-2

Stem-loop oni-mir-219b-2


Accession
MI0034700
Description
Oreochromis niloticus oni-mir-219b-2 precursor miRNA


Sequence

UGAUUGUCCAAACGCAAUUCUUGcaugugcuuuugugaaaccaggaguuguggauggacaucacg
((((.(((((..(((((((((((....(((....)))....)))))))))))..)))))))))..

Structure
--    U     AA           caug   u 
  UGAU GUCCA  CGCAAUUCUUG    ugc u
  |||| |||||  |||||||||||    |||  
  acua caggu  guguugaggac    gug u
gc    -     ag           caaa   u 


Annotation confidence Not enough data
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Genome context
CM001464.1: 347721-347785 [-]

Database links

Mature oni-miR-219b

Accession MIMAT0042759
Description Oreochromis niloticus oni-miR-219b mature miRNA
Sequence 1 - UGAUUGUCCAAACGCAAUUCUUG - 23
Evidence experimental
Illumina [1-2]

References

  1. PubMed ID: 25186727
    The genomic substrate for adaptive radiation in African cichlid fish
    "Brawand D, Wagner CE, Li YI, Malinsky M, Keller I, Fan S, Simakov O, Ng AY, Lim ZW, Bezault E, Turner-Maier J, Johnson J, Alcazar R, Noh HJ, Russell P, Aken B, Alfoldi J, Amemiya C, Azzouzi N, Baroiller JF, Barloy-Hubler F, Berlin A, Bloomquist R, Carleto"
    "Nature (2014) 513:375-381

  2. PubMed ID: 25199625
    Identification of male-specific amh duplication, sexually differentially expressed genes and microRNAs at early embryonic development of Nile tilapia (Oreochromis niloticus)
    Eshel O, Shirak A, Dor L, Band M, Zak T, Markovich-Gordon M, Chalifa-Caspi V, Feldmesser E, Weller JI, Seroussi E, Hulata G, Ron M
    BMC Genomics (2014) 15:774