miRBase entry: oni-mir-205-2

Stem-loop oni-mir-205-2


Accession
MI0034703
Description
Oreochromis niloticus oni-mir-205-2 precursor miRNA


Sequence

UCCUUCAUUCCACCGGAGUCUGuaucuguauuugaccagauuucaguggugugaaguguaag
..((((((.((((.((((((((..((.......)).)))))))).)))).))))))......

Structure
----UC      U    C        ua  ug 
      CUUCAU CCAC GGAGUCUG  uc  u
      |||||| |||| ||||||||  ||  a
      gaagug ggug cuuuagac  ag  u
gaaugu      u    a        -c  uu 


Annotation confidence Not enough data
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Genome context
CM001463.1: 7650873-7650934 [+]

Database links

Mature oni-miR-205

Accession MIMAT0042668
Description Oreochromis niloticus oni-miR-205 mature miRNA
Sequence 1 - UCCUUCAUUCCACCGGAGUCUG - 22
Evidence experimental
Illumina [1-2]

References

  1. PubMed ID: 25186727
    The genomic substrate for adaptive radiation in African cichlid fish
    "Brawand D, Wagner CE, Li YI, Malinsky M, Keller I, Fan S, Simakov O, Ng AY, Lim ZW, Bezault E, Turner-Maier J, Johnson J, Alcazar R, Noh HJ, Russell P, Aken B, Alfoldi J, Amemiya C, Azzouzi N, Baroiller JF, Barloy-Hubler F, Berlin A, Bloomquist R, Carleto"
    "Nature (2014) 513:375-381

  2. PubMed ID: 25199625
    Identification of male-specific amh duplication, sexually differentially expressed genes and microRNAs at early embryonic development of Nile tilapia (Oreochromis niloticus)
    Eshel O, Shirak A, Dor L, Band M, Zak T, Markovich-Gordon M, Chalifa-Caspi V, Feldmesser E, Weller JI, Seroussi E, Hulata G, Ron M
    BMC Genomics (2014) 15:774