miRBase entry: oni-mir-103-1

Stem-loop oni-mir-103-1


Accession
MI0034704
Description
Oreochromis niloticus oni-mir-103-1 precursor miRNA


Sequence

agccucuuuacagugcugccuugucuaaucauguucaAGCAGCAUUGUACAGGGCUAUGA
((((.((.(((((((((((.(((............)))))))))))))).))))))....

Structure
----    u  u           c   ucuaa 
    agcc cu uacagugcugc uug     u
    |||| || ||||||||||| |||      
    UCGG GA AUGUUACGACG Aac     c
AGUA    -  C           -   uugua 


Annotation confidence Not enough data
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Genome context
CM001445.1: 10282663-10282722 [+]

Database links

Mature oni-miR-103

Accession MIMAT0042677
Description Oreochromis niloticus oni-miR-103 mature miRNA
Sequence 38 - AGCAGCAUUGUACAGGGCUAUGA - 60
Evidence experimental
Illumina [1-2]

References

  1. PubMed ID: 25186727
    The genomic substrate for adaptive radiation in African cichlid fish
    "Brawand D, Wagner CE, Li YI, Malinsky M, Keller I, Fan S, Simakov O, Ng AY, Lim ZW, Bezault E, Turner-Maier J, Johnson J, Alcazar R, Noh HJ, Russell P, Aken B, Alfoldi J, Amemiya C, Azzouzi N, Baroiller JF, Barloy-Hubler F, Berlin A, Bloomquist R, Carleto"
    "Nature (2014) 513:375-381

  2. PubMed ID: 25199625
    Identification of male-specific amh duplication, sexually differentially expressed genes and microRNAs at early embryonic development of Nile tilapia (Oreochromis niloticus)
    Eshel O, Shirak A, Dor L, Band M, Zak T, Markovich-Gordon M, Chalifa-Caspi V, Feldmesser E, Weller JI, Seroussi E, Hulata G, Ron M
    BMC Genomics (2014) 15:774