miRBase entry: oni-mir-24a-4

Accession

MI0034705

Description

Oreochromis niloticus oni-mir-24a-4 precursor miRNA

Sequence

ugccuucugagcugacagcaguuugaucgaacacacUGGCUCAGUUCAGCAGGAAC
..(((.(((((((((...((((.((......)).))))..))))))))).)))...

Structure

-ug   u         cag    u  au 
   ccu cugagcuga   cagu ug  c
   ||| |||||||||   |||| ||   
   GGA GACUUGACU   GUca ac  g
CAA   C         -CG    c  aa

Annotation confidence Not enough data

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Genome context

CM001450.1: 30915471-30915526 [+]

Clustered miRNAs

2 other miRNAs are < 10 kb from oni-mir-24a-4

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Accession	MIMAT0042771
Description	Oreochromis niloticus oni-miR-24a-4 mature miRNA
Sequence	37 - UGGCUCAGUUCAGCAGGAAC - 56
Evidence	experimental Illumina [1]

PubMed ID: 25186727
The genomic substrate for adaptive radiation in African cichlid fish
"Brawand D, Wagner CE, Li YI, Malinsky M, Keller I, Fan S, Simakov O, Ng AY, Lim ZW, Bezault E, Turner-Maier J, Johnson J, Alcazar R, Noh HJ, Russell P, Aken B, Alfoldi J, Amemiya C, Azzouzi N, Baroiller JF, Barloy-Hubler F, Berlin A, Bloomquist R, Carleto"
"Nature (2014) 513:375-381