miRBase entry: oni-mir-184a

Stem-loop oni-mir-184a

Accession

MI0034711

Description

Oreochromis niloticus oni-mir-184a precursor miRNA

Sequence

uuaucacuuuuccagcccagcuauagauucuguauccguUGGACGGAGAACUGAUAAGGGC
((((((.((((((.(.((((((((((...)))))...))))).))))))).))))))....

Structure

----      c      a c     ---     a 
    uuauca uuuucc g ccagc   uauag  
    |||||| |||||| | |||||   ||||| u
    AAUAGU AAGAGG C GGUug   auguc  
CGGG      C      - A     ccu     u

Annotation confidence Not enough data

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Genome context

CM001444.1: 18708277-18708337 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from oni-mir-184a

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature oni-miR-184a

Accession	MIMAT0042773
Description	Oreochromis niloticus oni-miR-184a mature miRNA
Sequence	40 - UGGACGGAGAACUGAUAAGGGC - 61
Evidence	experimental Illumina [1-2]

References

PubMed ID: 25186727
The genomic substrate for adaptive radiation in African cichlid fish
"Brawand D, Wagner CE, Li YI, Malinsky M, Keller I, Fan S, Simakov O, Ng AY, Lim ZW, Bezault E, Turner-Maier J, Johnson J, Alcazar R, Noh HJ, Russell P, Aken B, Alfoldi J, Amemiya C, Azzouzi N, Baroiller JF, Barloy-Hubler F, Berlin A, Bloomquist R, Carleto"
"Nature (2014) 513:375-381

PubMed ID: 25199625
Identification of male-specific amh duplication, sexually differentially expressed genes and microRNAs at early embryonic development of Nile tilapia (Oreochromis niloticus)
Eshel O, Shirak A, Dor L, Band M, Zak T, Markovich-Gordon M, Chalifa-Caspi V, Feldmesser E, Weller JI, Seroussi E, Hulata G, Ron M
BMC Genomics (2014) 15:774