miRBase entry: oni-mir-375

Stem-loop oni-mir-375


Accession
MI0034712
Description
Oreochromis niloticus oni-mir-375 precursor miRNA

Literature search
1 open access papers mention oni-mir-375
(8 sentences)

Sequence

acguugagccucacguacaauaccugaagaugaaguUUUGUUCGUUCGGCUCGCGUUA
((((.(((((..(((.((((.((...........)).)))).)))..)))))))))..

Structure
--    u     uc   u    u  cuga 
  acgu gagcc  acg acaa ac    a
  |||| |||||  ||| |||| ||    g
  UGCG CUCGG  UGC UGUU ug    a
AU    -     CU   U    U  aagu 


Annotation confidence Not enough data
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Genome context
CM001459.1: 29307469-29307526 [-]

Database links

Mature oni-miR-375

Accession MIMAT0042774
Description Oreochromis niloticus oni-miR-375 mature miRNA
Sequence 37 - UUUGUUCGUUCGGCUCGCGUUA - 58
Evidence experimental
Illumina [1-2]

References

  1. PubMed ID: 25186727
    The genomic substrate for adaptive radiation in African cichlid fish
    "Brawand D, Wagner CE, Li YI, Malinsky M, Keller I, Fan S, Simakov O, Ng AY, Lim ZW, Bezault E, Turner-Maier J, Johnson J, Alcazar R, Noh HJ, Russell P, Aken B, Alfoldi J, Amemiya C, Azzouzi N, Baroiller JF, Barloy-Hubler F, Berlin A, Bloomquist R, Carleto"
    "Nature (2014) 513:375-381

  2. PubMed ID: 25199625
    Identification of male-specific amh duplication, sexually differentially expressed genes and microRNAs at early embryonic development of Nile tilapia (Oreochromis niloticus)
    Eshel O, Shirak A, Dor L, Band M, Zak T, Markovich-Gordon M, Chalifa-Caspi V, Feldmesser E, Weller JI, Seroussi E, Hulata G, Ron M
    BMC Genomics (2014) 15:774