miRBase entry: oni-mir-9a-7

Stem-loop oni-mir-9a-7


Accession
MI0034723
Description
Oreochromis niloticus oni-mir-9a-7 precursor miRNA


Sequence

UCUUUGGUUAUCUAGCUGUAUGaguuuauguaauaucaUAAAGCUAGAGAACCGAAUGUA
..(((((((.(((((((.(((((..((....))..))))).))))))).)))))))....

Structure
--UC       A       G     gu  a 
    UUUGGUU UCUAGCU UAUGa  uu u
    ||||||| ||||||| |||||  ||  
    AAGCCAA AGAUCGA AUacu  aa g
AUGU       G       A     au  u 


Annotation confidence Not enough data
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Genome context
CM001465.1: 15402050-15402109 [+]

Database links

Mature oni-miR-9a-5p

Accession MIMAT0042655
Description Oreochromis niloticus oni-miR-9a-5p mature miRNA
Sequence 1 - UCUUUGGUUAUCUAGCUGUAUG - 22
Evidence experimental
Illumina [1-2]

Mature oni-miR-9a-7-3p

Accession MIMAT0042777
Description Oreochromis niloticus oni-miR-9a-7-3p mature miRNA
Sequence 39 - UAAAGCUAGAGAACCGAAUGUA - 60
Evidence experimental
Illumina [1-2]

References

  1. PubMed ID: 25186727
    The genomic substrate for adaptive radiation in African cichlid fish
    "Brawand D, Wagner CE, Li YI, Malinsky M, Keller I, Fan S, Simakov O, Ng AY, Lim ZW, Bezault E, Turner-Maier J, Johnson J, Alcazar R, Noh HJ, Russell P, Aken B, Alfoldi J, Amemiya C, Azzouzi N, Baroiller JF, Barloy-Hubler F, Berlin A, Bloomquist R, Carleto"
    "Nature (2014) 513:375-381

  2. PubMed ID: 25199625
    Identification of male-specific amh duplication, sexually differentially expressed genes and microRNAs at early embryonic development of Nile tilapia (Oreochromis niloticus)
    Eshel O, Shirak A, Dor L, Band M, Zak T, Markovich-Gordon M, Chalifa-Caspi V, Feldmesser E, Weller JI, Seroussi E, Hulata G, Ron M
    BMC Genomics (2014) 15:774