miRBase entry: oni-mir-147

Stem-loop oni-mir-147


Accession
MI0034748
Description
Oreochromis niloticus oni-mir-147 precursor miRNA


Sequence

acagaaucguuucugcacaaacuaggacacuuugacacucaGUGUGCGGAAAUGCUUCUGCUC
.(((((.((((((((((((....((............))...)))))))))))).)))))...

Structure
--a     u            aacu  gacac 
   cagaa cguuucugcaca    ag     u
   ||||| ||||||||||||    ||      
   GUCUU GUAAAGGCGUGU    uc     u
CUC     C            -Gac  acagu 


Annotation confidence Not enough data
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Genome context
CM001444.1: 3671514-3671576 [-]

Database links

Mature oni-miR-147

Accession MIMAT0042801
Description Oreochromis niloticus oni-miR-147 mature miRNA
Sequence 42 - GUGUGCGGAAAUGCUUCUGCUC - 63
Evidence experimental
Illumina [1-2]

References

  1. PubMed ID: 25186727
    The genomic substrate for adaptive radiation in African cichlid fish
    "Brawand D, Wagner CE, Li YI, Malinsky M, Keller I, Fan S, Simakov O, Ng AY, Lim ZW, Bezault E, Turner-Maier J, Johnson J, Alcazar R, Noh HJ, Russell P, Aken B, Alfoldi J, Amemiya C, Azzouzi N, Baroiller JF, Barloy-Hubler F, Berlin A, Bloomquist R, Carleto"
    "Nature (2014) 513:375-381

  2. PubMed ID: 25199625
    Identification of male-specific amh duplication, sexually differentially expressed genes and microRNAs at early embryonic development of Nile tilapia (Oreochromis niloticus)
    Eshel O, Shirak A, Dor L, Band M, Zak T, Markovich-Gordon M, Chalifa-Caspi V, Feldmesser E, Weller JI, Seroussi E, Hulata G, Ron M
    BMC Genomics (2014) 15:774