miRBase entry: oni-mir-726

Stem-loop oni-mir-726

Accession

MI0034754

Description

Oreochromis niloticus oni-mir-726 precursor miRNA

Literature search

1 open access papers mention oni-mir-726
(7 sentences)

Sequence

auuccgcuaguucugaacuauucguguuugucaaaagUUCACUACUAGCAGAACUCAGA
.(((.((((((..((((((................))))))..)))))).)))......

Structure

-----a   c      uc      auucgug 
      uuc gcuagu  ugaacu       u
      ||| ||||||  ||||||        
      AAG CGAUCA  ACUUga       u
AGACUC   A      UC      aaacugu

Annotation confidence Not enough data

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Genome context

CM001448.1: 9850577-9850635 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from oni-mir-726

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature oni-miR-726

Accession	MIMAT0042807
Description	Oreochromis niloticus oni-miR-726 mature miRNA
Sequence	38 - UUCACUACUAGCAGAACUCAGA - 59
Evidence	experimental Illumina [1-2]

References

PubMed ID: 25186727
The genomic substrate for adaptive radiation in African cichlid fish
"Brawand D, Wagner CE, Li YI, Malinsky M, Keller I, Fan S, Simakov O, Ng AY, Lim ZW, Bezault E, Turner-Maier J, Johnson J, Alcazar R, Noh HJ, Russell P, Aken B, Alfoldi J, Amemiya C, Azzouzi N, Baroiller JF, Barloy-Hubler F, Berlin A, Bloomquist R, Carleto"
"Nature (2014) 513:375-381

PubMed ID: 25199625
Identification of male-specific amh duplication, sexually differentially expressed genes and microRNAs at early embryonic development of Nile tilapia (Oreochromis niloticus)
Eshel O, Shirak A, Dor L, Band M, Zak T, Markovich-Gordon M, Chalifa-Caspi V, Feldmesser E, Weller JI, Seroussi E, Hulata G, Ron M
BMC Genomics (2014) 15:774