miRBase entry: oni-mir-10574

Stem-loop oni-mir-10574


Accession
MI0034777
Description
Oreochromis niloticus oni-mir-10574 precursor miRNA


Sequence

AAGAUAGAAUGAGAUGAGGACUuuuuuuuuuuuuuuugguccucaucuugucccauuuuca
(((((.(.((((((((((((((...............)))))))))))))).).)))))..

Structure
--     A A              uuuuuu 
  AAGAU G AUGAGAUGAGGACU      u
  ||||| | ||||||||||||||      u
  uuuua c uguucuacuccugg      u
ac     c c              uuuuuu 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
GL831288.1: 1017652-1017712 [-]

Database links

Mature oni-miR-10574

Accession MIMAT0042840
Description Oreochromis niloticus oni-miR-10574 mature miRNA
Sequence 1 - AAGAUAGAAUGAGAUGAGGACU - 22
Evidence experimental
Illumina [1-2]

References

  1. PubMed ID: 25186727
    The genomic substrate for adaptive radiation in African cichlid fish
    "Brawand D, Wagner CE, Li YI, Malinsky M, Keller I, Fan S, Simakov O, Ng AY, Lim ZW, Bezault E, Turner-Maier J, Johnson J, Alcazar R, Noh HJ, Russell P, Aken B, Alfoldi J, Amemiya C, Azzouzi N, Baroiller JF, Barloy-Hubler F, Berlin A, Bloomquist R, Carleto"
    "Nature (2014) 513:375-381

  2. PubMed ID: 25199625
    Identification of male-specific amh duplication, sexually differentially expressed genes and microRNAs at early embryonic development of Nile tilapia (Oreochromis niloticus)
    Eshel O, Shirak A, Dor L, Band M, Zak T, Markovich-Gordon M, Chalifa-Caspi V, Feldmesser E, Weller JI, Seroussi E, Hulata G, Ron M
    BMC Genomics (2014) 15:774