miRBase entry: oni-mir-10576

Stem-loop oni-mir-10576


Accession
MI0034781
Description
Oreochromis niloticus oni-mir-10576 precursor miRNA


Sequence

UGUAGAGCAGACUGGAUUCUCUgucucccuuuuuagaacggaggaucuuuuuugcucugcagu
(((((((((((..(((((((((((((........)).)))))))))))..)))))))))))..

Structure
--           CU           -  ccc 
  UGUAGAGCAGA  GGAUUCUCUgu cu   u
  |||||||||||  ||||||||||| ||    
  acgucucguuu  ucuaggaggca ga   u
ug           uu           a  uuu 


Annotation confidence Not enough data
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Genome context
CM001451.1: 20205566-20205628 [+]

Database links

Mature oni-miR-10576

Accession MIMAT0042843
Description Oreochromis niloticus oni-miR-10576 mature miRNA
Sequence 1 - UGUAGAGCAGACUGGAUUCUCU - 22
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 25186727
    The genomic substrate for adaptive radiation in African cichlid fish
    "Brawand D, Wagner CE, Li YI, Malinsky M, Keller I, Fan S, Simakov O, Ng AY, Lim ZW, Bezault E, Turner-Maier J, Johnson J, Alcazar R, Noh HJ, Russell P, Aken B, Alfoldi J, Amemiya C, Azzouzi N, Baroiller JF, Barloy-Hubler F, Berlin A, Bloomquist R, Carleto"
    "Nature (2014) 513:375-381