miRBase entry: pny-mir-10a-2

Stem-loop pny-mir-10a-2


Accession
MI0034791
Description
Pundamilia nyererei pny-mir-10a-2 precursor miRNA


Sequence

UACCCUGUAGAACCGAAUUUGUgugaaguacaagcagucgcaaauacgucucuacaggaaua
...((((((((..((.(((((((....((....))...))))))).))..))))))))....

Structure
-UAC        AC  A       ugaa  a 
    CCUGUAGA  CG AUUUGUg    gu c
    ||||||||  || |||||||    ||  
    ggacaucu  gc uaaacgc    cg a
auaa        cu  a       -uga  a 


Annotation confidence Not enough data
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Genome context
JH419252.1: 1926893-1926954 [-]

Database links

Mature pny-miR-10a

Accession MIMAT0042852
Description Pundamilia nyererei pny-miR-10a mature miRNA
Sequence 1 - UACCCUGUAGAACCGAAUUUGU - 22
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 25186727
    The genomic substrate for adaptive radiation in African cichlid fish
    "Brawand D, Wagner CE, Li YI, Malinsky M, Keller I, Fan S, Simakov O, Ng AY, Lim ZW, Bezault E, Turner-Maier J, Johnson J, Alcazar R, Noh HJ, Russell P, Aken B, Alfoldi J, Amemiya C, Azzouzi N, Baroiller JF, Barloy-Hubler F, Berlin A, Bloomquist R, Carleto"
    "Nature (2014) 513:375-381