miRBase entry: pny-mir-21-1

Stem-loop pny-mir-21-1


Accession
MI0034799
Description
Pundamilia nyererei pny-mir-21-1 precursor miRNA


Sequence

UAGCUUAUCAGACUGGUGUUGGCuguuggaugugcuuggcaacagcggucuguaagcuggc
(((((((.(((((((.(((((.(.((.......))..).))))).))))))))))))))..

Structure
--       U       G     G -u  ug 
  UAGCUUA CAGACUG UGUUG C  gu  g
  ||||||| ||||||| ||||| |  ||  a
  gucgaau gucuggc acaac g  cg  u
cg       -       g     g uu  ug 


Annotation confidence Not enough data
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Genome context
JH419208.1: 1272911-1272971 [-]

Database links

Mature pny-miR-21

Accession MIMAT0042858
Description Pundamilia nyererei pny-miR-21 mature miRNA
Sequence 1 - UAGCUUAUCAGACUGGUGUUGGC - 23
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 25186727
    The genomic substrate for adaptive radiation in African cichlid fish
    "Brawand D, Wagner CE, Li YI, Malinsky M, Keller I, Fan S, Simakov O, Ng AY, Lim ZW, Bezault E, Turner-Maier J, Johnson J, Alcazar R, Noh HJ, Russell P, Aken B, Alfoldi J, Amemiya C, Azzouzi N, Baroiller JF, Barloy-Hubler F, Berlin A, Bloomquist R, Carleto"
    "Nature (2014) 513:375-381