miRBase entry: pny-mir-100-2

Accession

MI0034802

Description

Pundamilia nyererei pny-mir-100-2 precursor miRNA

Sequence

AACCCGUAGAUCCGAACUUGUGgugacuggcugcacaagcucguaucuauagguaug
.(((.((((((.(((.((((((...........)))))).))).)))))).)))...

Structure

--A   C      C   A      guga 
   ACC GUAGAU CGA CUUGUG    c
   ||| |||||| ||| ||||||    u
   ugg uaucua gcu gaacac    g
gua   a      u   c      gucg

Annotation confidence Not enough data

Do you think this miRNA is real?

Genome context

JH419269.1: 2046460-2046516 [-]

Clustered miRNAs

2 other miRNAs are < 10 kb from pny-mir-100-2

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Accession	MIMAT0042860
Description	Pundamilia nyererei pny-miR-100 mature miRNA
Sequence	1 - AACCCGUAGAUCCGAACUUGUG - 22
Evidence	experimental Illumina [1]

PubMed ID: 25186727
The genomic substrate for adaptive radiation in African cichlid fish
"Brawand D, Wagner CE, Li YI, Malinsky M, Keller I, Fan S, Simakov O, Ng AY, Lim ZW, Bezault E, Turner-Maier J, Johnson J, Alcazar R, Noh HJ, Russell P, Aken B, Alfoldi J, Amemiya C, Azzouzi N, Baroiller JF, Barloy-Hubler F, Berlin A, Bloomquist R, Carleto"
"Nature (2014) 513:375-381