miRBase entry: pny-mir-462

Stem-loop pny-mir-462

Accession

MI0034804

Description

Pundamilia nyererei pny-mir-462 precursor miRNA

Sequence

UAACGGAACCCAUAAUGCAGCUGugauucugagccccagcugguuaugggguccguuucc
.((((((.((((((((.((((((.(..........))))))))))))))).))))))...

Structure

--U      A        G      u auuc 
   AACGGA CCCAUAAU CAGCUG g    u
   |||||| |||||||| |||||| |     
   uugccu ggguauug gucgac c    g
ccu      g        -      - ccga

Annotation confidence Not enough data

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Genome context

JH419244.1: 826404-826463 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from pny-mir-462

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature pny-miR-462

Accession	MIMAT0042862
Description	Pundamilia nyererei pny-miR-462 mature miRNA
Sequence	1 - UAACGGAACCCAUAAUGCAGCUG - 23
Evidence	experimental Illumina [1]

References

PubMed ID: 25186727
The genomic substrate for adaptive radiation in African cichlid fish
"Brawand D, Wagner CE, Li YI, Malinsky M, Keller I, Fan S, Simakov O, Ng AY, Lim ZW, Bezault E, Turner-Maier J, Johnson J, Alcazar R, Noh HJ, Russell P, Aken B, Alfoldi J, Amemiya C, Azzouzi N, Baroiller JF, Barloy-Hubler F, Berlin A, Bloomquist R, Carleto"
"Nature (2014) 513:375-381