miRBase entry: pny-mir-199-4

Stem-loop pny-mir-199-4


Accession
MI0034816
Description
Pundamilia nyererei pny-mir-199-4 precursor miRNA


Sequence

cccaguguucagacuaccuguucaucaggcugcagcugaACAGUAGUCUGCACAUUGGUU
.(((((((.((((((((.((((((.(........).)))))))))))))).)))))))..

Structure
-c       u        c      u agg 
  ccagugu cagacuac uguuca c   c
  ||||||| |||||||| |||||| |    
  GGUUACA GUCUGAUG ACAagu g   u
UU       C        -      c acg 


Annotation confidence Not enough data
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Genome context
JH419363.1: 469374-469433 [+]

Database links

Mature pny-miR-199

Accession MIMAT0042866
Description Pundamilia nyererei pny-miR-199 mature miRNA
Sequence 40 - ACAGUAGUCUGCACAUUGGUU - 60
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 25186727
    The genomic substrate for adaptive radiation in African cichlid fish
    "Brawand D, Wagner CE, Li YI, Malinsky M, Keller I, Fan S, Simakov O, Ng AY, Lim ZW, Bezault E, Turner-Maier J, Johnson J, Alcazar R, Noh HJ, Russell P, Aken B, Alfoldi J, Amemiya C, Azzouzi N, Baroiller JF, Barloy-Hubler F, Berlin A, Bloomquist R, Carleto"
    "Nature (2014) 513:375-381