miRBase entry: pny-mir-126

Stem-loop pny-mir-126


Accession
MI0034837
Description
Pundamilia nyererei pny-mir-126 precursor miRNA


Sequence

CAUUAUUACUUUUGGUACGCGcuaugccacucucaacucguaccgugaguaauaaugca
(((((((((((.(((((((.(...............).))))))).)))))))))))..

Structure
--           U       C cuaugc 
  CAUUAUUACUU UGGUACG G      c
  ||||||||||| ||||||| |      a
  guaauaaugag gccaugc c      c
ac           u       u aacucu 


Annotation confidence Not enough data
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Genome context
JH419207.1: 3748364-3748422 [+]

Database links

Mature pny-miR-126

Accession MIMAT0042879
Description Pundamilia nyererei pny-miR-126 mature miRNA
Sequence 1 - CAUUAUUACUUUUGGUACGCG - 21
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 25186727
    The genomic substrate for adaptive radiation in African cichlid fish
    "Brawand D, Wagner CE, Li YI, Malinsky M, Keller I, Fan S, Simakov O, Ng AY, Lim ZW, Bezault E, Turner-Maier J, Johnson J, Alcazar R, Noh HJ, Russell P, Aken B, Alfoldi J, Amemiya C, Azzouzi N, Baroiller JF, Barloy-Hubler F, Berlin A, Bloomquist R, Carleto"
    "Nature (2014) 513:375-381