miRBase entry: pny-mir-125a-2

Accession

MI0034841

Description

Pundamilia nyererei pny-mir-125a-2 precursor miRNA

Sequence

UCCCUGAGACCCUUAACCUGUGaggucaaagcaggucacaggugagguccucggga
..((((((..(((((.(((((((............))))))))))))..)))))).

Structure

UC      AC     A       gguca 
  CCUGAG  CCUUA CCUGUGa     a
  ||||||  ||||| |||||||      
  gggcuc  ggagu ggacacu     a
-a      cu     -       ggacg

Annotation confidence Not enough data

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Genome context

JH419314.1: 85105-85160 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from pny-mir-125a-2

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Accession	MIMAT0042881
Description	Pundamilia nyererei pny-miR-125a mature miRNA
Sequence	1 - UCCCUGAGACCCUUAACCUGUG - 22
Evidence	experimental Illumina [1]

PubMed ID: 25186727
The genomic substrate for adaptive radiation in African cichlid fish
"Brawand D, Wagner CE, Li YI, Malinsky M, Keller I, Fan S, Simakov O, Ng AY, Lim ZW, Bezault E, Turner-Maier J, Johnson J, Alcazar R, Noh HJ, Russell P, Aken B, Alfoldi J, Amemiya C, Azzouzi N, Baroiller JF, Barloy-Hubler F, Berlin A, Bloomquist R, Carleto"
"Nature (2014) 513:375-381