miRBase entry: pny-mir-153a-2

Stem-loop pny-mir-153a-2


Accession
MI0034855
Description
Pundamilia nyererei pny-mir-153a-2 precursor miRNA


Sequence

ucauuuuugugauguugcagcuaguaauauaagcccagUUGCAUAGUCACAAAAGUGAUC
(((((((((((((..(((((((.((.......))..)))))))..)))))))))))))..

Structure
--             gu       -a  aa 
  ucauuuuugugau  ugcagcu  gu  u
  |||||||||||||  |||||||  ||  a
  AGUGAAAACACUG  ACGUUga  cg  u
CU             AU       cc  aa 


Annotation confidence Not enough data
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Genome context
JH419308.1: 384551-384610 [+]

Database links

Mature pny-miR-153a

Accession MIMAT0042892
Description Pundamilia nyererei pny-miR-153a mature miRNA
Sequence 39 - UUGCAUAGUCACAAAAGUGAUC - 60
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 25186727
    The genomic substrate for adaptive radiation in African cichlid fish
    "Brawand D, Wagner CE, Li YI, Malinsky M, Keller I, Fan S, Simakov O, Ng AY, Lim ZW, Bezault E, Turner-Maier J, Johnson J, Alcazar R, Noh HJ, Russell P, Aken B, Alfoldi J, Amemiya C, Azzouzi N, Baroiller JF, Barloy-Hubler F, Berlin A, Bloomquist R, Carleto"
    "Nature (2014) 513:375-381