miRBase entry: pny-mir-206

Stem-loop pny-mir-206

Accession

MI0034866

Description

Pundamilia nyererei pny-mir-206 precursor miRNA

Sequence

acaugcuuccuuauauccccauauuaauacgccacuuaUGGAAUGUAAGGAAGUGUGUGG
((((((((((((((((..(((((.............))))).))))))))))))))))..

Structure

--                cc     uuaau 
  acaugcuuccuuauau  ccaua     a
  ||||||||||||||||  |||||     c
  UGUGUGAAGGAAUGUA  GGUau     g
GG                -A     ucacc

Annotation confidence Not enough data

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Genome context

JH419263.1: 437135-437194 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from pny-mir-206

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature pny-miR-206

Accession	MIMAT0042897
Description	Pundamilia nyererei pny-miR-206 mature miRNA
Sequence	39 - UGGAAUGUAAGGAAGUGUGUGG - 60
Evidence	experimental Illumina [1]

References

PubMed ID: 25186727
The genomic substrate for adaptive radiation in African cichlid fish
"Brawand D, Wagner CE, Li YI, Malinsky M, Keller I, Fan S, Simakov O, Ng AY, Lim ZW, Bezault E, Turner-Maier J, Johnson J, Alcazar R, Noh HJ, Russell P, Aken B, Alfoldi J, Amemiya C, Azzouzi N, Baroiller JF, Barloy-Hubler F, Berlin A, Bloomquist R, Carleto"
"Nature (2014) 513:375-381