Stem-loop pny-mir-18a

Accession

MI0034902

Description

Pundamilia nyererei pny-mir-18a precursor miRNA

Sequence

UAAGGUGCAUCUAGUGCAGAUAgugaaguagacuagcaccuacugcccuaagugcuccuucug
.((((.((((.(((.((((.(((((...........)).))))))).))).)))).))))...

Structure

--U    U    C   U    A   -  aagu 
   AAGG GCAU UAG GCAG UAg ug    a
   |||| |||| ||| |||| ||| ||    g
   uucc cgug auc cguc auc ac    a
guc    u    a   c    -   c  gauc 

Annotation confidence Not enough data

Genome context

JH419214.1: 5902871-5902933 [-]

Clustered miRNAs

5 other miRNAs are < 10 kb from pny-mir-18a

Mature pny-miR-18a

• Accession: MIMAT0042923
• Description: Pundamilia nyererei pny-miR-18a mature miRNA
• Sequence: 1 - UAAGGUGCAUCUAGUGCAGAUA - 22
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25186727
   The genomic substrate for adaptive radiation in African cichlid fish
   "Brawand D, Wagner CE, Li YI, Malinsky M, Keller I, Fan S, Simakov O, Ng AY, Lim ZW, Bezault E, Turner-Maier J, Johnson J, Alcazar R, Noh HJ, Russell P, Aken B, Alfoldi J, Amemiya C, Azzouzi N, Baroiller JF, Barloy-Hubler F, Berlin A, Bloomquist R, Carleto"
   "Nature (2014) 513:375-381