miRBase entry: pny-mir-101a

Stem-loop pny-mir-101a


Accession
MI0034905
Description
Pundamilia nyererei pny-mir-101a precursor miRNA


Sequence

ucaguuaucacagugcugaugcuguccccaucgaaggUACAGUACUGUGAUAACUGAAG
((((((((((((((((((.((((.((......)).))))))))))))))))))))))..

Structure
--                  a    g  cc 
  ucaguuaucacagugcug ugcu uc  c
  |||||||||||||||||| |||| ||   
  AGUCAAUAGUGUCAUGAC AUgg ag  a
GA                  -    a  cu 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
JH419335.1: 268873-268931 [-]

Database links

Mature pny-miR-101a

Accession MIMAT0042926
Description Pundamilia nyererei pny-miR-101a mature miRNA
Sequence 38 - UACAGUACUGUGAUAACUGAAG - 59
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 25186727
    The genomic substrate for adaptive radiation in African cichlid fish
    "Brawand D, Wagner CE, Li YI, Malinsky M, Keller I, Fan S, Simakov O, Ng AY, Lim ZW, Bezault E, Turner-Maier J, Johnson J, Alcazar R, Noh HJ, Russell P, Aken B, Alfoldi J, Amemiya C, Azzouzi N, Baroiller JF, Barloy-Hubler F, Berlin A, Bloomquist R, Carleto"
    "Nature (2014) 513:375-381